dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02963
Location and strand information: 361301 - 363991 (+)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02964
Location and strand information: 364073 - 364735 (-)
Family: null
Protein type: null
Protein description: Uracil-DNA glycosylase

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02965
Location and strand information: 364738 - 365775 (-)
Family: null
Protein type: null
Protein description: Aspartate--ammonia ligase

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02967
Location and strand information: 366146 - 367549 (-)
Family: GH50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1187
Protein molecular weight: 52956.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02968
Location and strand information: 367553 - 370213 (-)
Family: CBM57|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5087
Protein molecular weight: 100795.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02969
Location and strand information: 370213 - 370992 (-)
Family: CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.1117
Protein molecular weight: 29390.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02970
Location and strand information: 371089 - 372684 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02971
Location and strand information: 372698 - 375757 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02972
Location and strand information: 375918 - 378434 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02973
Location and strand information: 378395 - 379987 (-)
Family: Reg_prop+Reg_prop
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001461_5|CGC7
Gene ID: MGYG000001461_02974
Location and strand information: 380198 - 381832 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1749
Protein molecular weight: 61948.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001461_02963	LPS-assembly protein LptD	TC	361301	363991	+	1.B.42.1.8
MGYG000001461_02964	Uracil-DNA glycosylase	null	364073	364735	-	UDG
MGYG000001461_02965	Aspartate--ammonia ligase	null	364738	365775	-	AsnA
MGYG000001461_02967	hypothetical protein	CAZyme	366146	367549	-	GH50
MGYG000001461_02968	Beta-galactosidase	CAZyme	367553	370213	-	CBM57\| GH2
MGYG000001461_02969	hypothetical protein	CAZyme	370213	370992	-	CE6
MGYG000001461_02970	hypothetical protein	null	371089	372684	-	SusD-like_3\| SusD_RagB
MGYG000001461_02971	TonB-dependent receptor SusC	TC	372698	375757	-	1.B.14.6.1
MGYG000001461_02972	Sensor histidine kinase RcsC	TF	375918	378434	-	HTH_AraC
MGYG000001461_02973	hypothetical protein	STP	378395	379987	-	Reg_prop\| Reg_prop
MGYG000001461_02974	hypothetical protein	CAZyme	380198	381832	+	GH29
Protein ID	Protein Name	Type	Start	End	Strand	Signature